tREeBOOT

tREeBOOT is a Java program (with methods described in Moore et al. 2006) to perform a variety of supertree bootstrapping analyses, in conjunction with paup and mincut (Page).

download: (soon)

report or view bugs

citations

  • Smith, S. A., and B. R. Moore. 2006. tREeBOOT: Assessing phylogenetic uncertainty in supertrees. Bioinformatics (in prep).
  • Moore, B. R., S. A. Smith, M. J. Donoghue. Increasing Data Transparency and Estimating Phylogenetic Uncertainty in Supertrees: Approaches Using Nonparametric Bootstrapping. Syst. Biol. in press.